Get Tuxedo and Kallisto Pipelines on the Server

January 09, 2020


Download a pipeline directly on the server from a GitHub repo;

  • kallisto_deseq2 
    wget https://raw.githubusercontent.com/mpg-age-bioinformatics/htseq-tools/master/kallisto_deseq2.sh
  • Tuxedo 
    wget https://raw.githubusercontent.com/mpg-age-bioinformatics/htseq-tools/master/tuxedo_v3-slurm.sh